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--- |
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library_name: transformers |
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license: mit |
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base_model: emilyalsentzer/Bio_ClinicalBERT |
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tags: |
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- generated_from_trainer |
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datasets: |
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- ncbi_disease |
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metrics: |
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- precision |
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- recall |
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- f1 |
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- accuracy |
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model-index: |
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- name: bert-finetuned-ner |
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results: |
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- task: |
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name: Token Classification |
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type: token-classification |
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dataset: |
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name: ncbi_disease |
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type: ncbi_disease |
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config: ncbi_disease |
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split: validation |
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args: ncbi_disease |
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metrics: |
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- name: Precision |
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type: precision |
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value: 0.7952941176470588 |
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- name: Recall |
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type: recall |
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value: 0.8589580686149937 |
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- name: F1 |
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type: f1 |
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value: 0.8259010384850336 |
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- name: Accuracy |
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type: accuracy |
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value: 0.9841210883090352 |
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--- |
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You |
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should probably proofread and complete it, then remove this comment. --> |
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# bert-finetuned-ner |
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This model is a fine-tuned version of [emilyalsentzer/Bio_ClinicalBERT](https://huggingface.co/emilyalsentzer/Bio_ClinicalBERT) on the ncbi_disease dataset. |
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It achieves the following results on the evaluation set: |
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- Loss: 0.0623 |
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- Precision: 0.7953 |
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- Recall: 0.8590 |
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- F1: 0.8259 |
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- Accuracy: 0.9841 |
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## Model description |
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More information needed |
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## Intended uses & limitations |
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More information needed |
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## Training and evaluation data |
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More information needed |
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## Training procedure |
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### Training hyperparameters |
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The following hyperparameters were used during training: |
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- learning_rate: 2e-05 |
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- train_batch_size: 8 |
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- eval_batch_size: 8 |
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- seed: 42 |
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08 |
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- lr_scheduler_type: linear |
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- num_epochs: 3 |
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### Training results |
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| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy | |
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|:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:| |
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| 0.1204 | 1.0 | 680 | 0.0536 | 0.7417 | 0.8247 | 0.7810 | 0.9824 | |
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| 0.0386 | 2.0 | 1360 | 0.0542 | 0.7808 | 0.8463 | 0.8122 | 0.9831 | |
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| 0.0144 | 3.0 | 2040 | 0.0623 | 0.7953 | 0.8590 | 0.8259 | 0.9841 | |
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### Framework versions |
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- Transformers 4.44.2 |
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- Pytorch 2.4.0+cu121 |
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- Datasets 3.0.0 |
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- Tokenizers 0.19.1 |
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